| Sample ID | test1 |
| Assay | Single-cell flv_CR |
| Chemistry | flv |
| Software Version | 1.12.0b0 |
| Raw Reads | 45,266 |
| Valid Reads | 45,239(99.94%) |
| Q30 of Barcodes | 96.27% |
| Q30 of UMIs | 96.45% |
| Reads Mapped To Any V(D)J Gene | 89.5% |
| Reads Mapped To TRA | 27.2% |
| Reads Mapped To TRB | 62.3% |
| Estimated Number of Cells | 17 |
| Fraction Reads in Cells | 89.7% |
| Mean Reads per Cell | 2,661 |
| Mean Used Reads per Cell | 2,337 |
| Median Used TRA UMIs per Cell | 3 |
| Median Used TRB UMIs per Cell | 5 |
| Cells With Productive V-J Spanning Pair | 70.6% |
| Cells With Productive V-J Spanning (TRA, TRB) Pair | 70.6% |
| Cells With TRA Contig | 82.4% |
| Cells With CDR3-annotated TRA Contig | 82.4% |
| Cells With V-J Spanning TRA Contig | 82.4% |
| Cells With Productive TRA Contig | 82.4% |
| Cells With TRB Contig | 94.1% |
| Cells With CDR3-annotated TRB Contig | 88.2% |
| Cells With V-J Spanning TRB Contig | 88.2% |
| Cells With Productive TRB Contig | 88.2% |
| Cells Match with ScRNA-seq Analysis | 15 |
| Cells With Productive V-J Spanning Pair | 12(80.0%) |
| Cells With Productive V-J Spanning (TRA, TRB) Pair | 12(80.0%) |
| Cells With TRA Contig | 14(93.33%) |
| Cells With CDR3-annotated TRA Contig | 14(93.33%) |
| Cells With V-J Spanning TRA Contig | 14(93.33%) |
| Cells With Productive TRA Contig | 14(93.33%) |
| Cells With TRB Contig | 13(86.67%) |
| Cells With CDR3-annotated TRB Contig | 13(86.67%) |
| Cells With V-J Spanning TRB Contig | 13(86.67%) |
| Cells With Productive TRB Contig | 13(86.67%) |
| ClonotypeID | CDR3_aa | Frequency | Proportion |
|---|---|---|---|
| 1 | TRA:CAALDSNYQLIW | 2 | 11.76% |
| 2 | TRB:CASSDISGSPQEQYV TRA:CAEKGSNYKLTF TRA:CAVSGYSTLTF |
2 | 11.76% |
| 3 | TRB:CALYHYEQYF | 1 | 5.88% |
| 4 | TRB:CSVTGNTGELFF TRA:CATDAGGGNKLTF |
1 | 5.88% |
| 5 | TRB:CSAREGRGQETQYF TRA:CALGGWGKLIF |
1 | 5.88% |
| 6 | TRB:CSAREQRVETGELFF | 1 | 5.88% |
| 7 | TRB:CSVRGTSGDTGELFF TRA:CAVMDSNYQLIW |
1 | 5.88% |
| 8 | TRB:CASSTNPYNEQFF TRA:CAVNMDSNYQLIW |
1 | 5.88% |
| 9 | TRB:CASSFPGENEQFF TRA:CALTLSGSARQLTF |
1 | 5.88% |
| 10 | TRB:CASSDSSAGGVEQFF TRB:CASSSWTSGSGEQFF TRA:CAALDSNYQLIW TRA:CVVSDRGSTLGRLYF |
1 | 5.88% |
| 11 | TRB:CASSLVTGDNEQFF TRA:CAVVTGTASKLTF |
1 | 5.88% |
| 12 | TRB:CASSLALRGIEQFF TRA:CAVSGDSSYKLIF |
1 | 5.88% |
| 13 | TRB:CATSNSRGSVNEQFF TRA:CAFPPPPETSGSRLTF |
1 | 5.88% |
| 14 | TRB:CASRRSDGGLYEQYF TRB:CASSDSLLGDLNEQFF TRA:CAALDSNYQLIW |
1 | 5.88% |
| 15 | TRB:CASSFAGLAGEKSYNEQFF TRA:CAMTWYSSASKIIF |
1 | 5.88% |